Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920371.1_cds_XP_016469515.1_62054
CDS Infomation

[gene=LOC107791886] [db_xref=GeneID:107791886] [protein=uncharacterized protein LOC107791886] [protein_id=XP_016469515.1] [location=join(47003..47171,47682..47769,53298..53358,53474..53610,57976..58028,58116..58185,58266..58396,58592..58762,58849..59142,59662..59709,59826..59866,60846..60933,61014..61206,61342..61473,62532..63144)] [gbkey=CDS]
Sequence

ATGTCAATTCACTTCAAATTCAGGAGCTGTCCAAGCTTCGATTCCGTTGATATAGACGGC
CGGCCGTCTATCTCGGTGCGGGAGCTGAGGTTGAAGATCATCCGCCGCAAGAATCTCAAC
ATTTGTCAGGACTTTGATCTCGTTTTCTCTGACGCCCTCTCCGGCCAAGAGTATAATGAC
GAAAATTTTCAGATTTCGAGTGGGTCAAGTGTAATTGTCAAGAGAGTTCCCGCTGGAACG
ATCCCTTCAACTACTAAGCCGCCAATTGGTATAGTGAAGGATTTAGGGCTGAAAGATGCT
GATCTTATTTATCATGCAAGTGGGCAAGTAGATGTATTTGATGACTTTGGGGCTGACATT
TGTCCGGTGGCTGAGGGAACATTTCTCGACAGTGATGTAGGGTTTGGCAATAAGAACTGC
TGGGACTTTGAGAAAGAAAACCTTTCTGGTCCAAGGTTTCAGAATCAAAAGCTTGATTCA
AGTGACCTAAGTCAAGCTATCCAAAGAGGTTCTAATCAAAGCAAGAATGATGCAAAATTA
CCTGAACCAAAAACTGGAGATGTGGCAACATTGCAAAAGGTGGTAAACCCCAATATTCCA
GCATTGCCCAATTGTAATTTGCCAGCAGAACTGAAATGCCCTCTCTGCAACACCTTTTTT
AAGGATGCTGTGATGATACCTTGTTGCCAGCACAGTTTTTGTGAGAAATGCATTCGTCTA
GTTCTTCTTGAAAAGGCGATGTGCCCAAAATGCCTTTCTAGTAGATGTAAAGTGGAAAAT
CTGCTACCAAATTTATCTCTCAGGCAAGCGATTGAGCATTTTCTTGAATCTCAGATGGTT
GTCACTGGGTCAGAAAATGCTTTACGCAAATATGCTCCAGATGGTGAATCTGGAATTCAG
ATGAAGGATGTTTCCTGTGCGGTTACTGTTGTACAACGGGAACCAGAGATGCCTCATTCA
CCCTCAGCTACTGGAAAAGGATCCAATCAAGTAATGGCAGAATCTTTTTATGACTCACTT
ATTCGGAAGAATTCAAGGACAATGCAACAAATGGATGGAGGAAGAGGTCGATATGCTAAT
CATTGGAACTTTCCAAGTGTACCTGATGACCCAGAAGATCGTCAGGGTGAAAGCAAGCCT
CTTAATTTGCTTCATTCACATGTTCAGGATGAAGCTGATTCTTCCATCAAGAAGAATAAA
GGCCAGTGGTGTGACACAAGAGGCGGGGACGTGAATTTTCTGCCTGCTGGTAGAGTTAAA
AAGGACCGTAACTGTTACATGTGTGGTTCTCCTGATCATCTCATCAGAGACTGCGCTTTT
GCTTCCAATCCAAATCCGATGCTTCAGACAGGAAATCCCATGCTTACGGGTGGGTTTCCT
GGCTATCCATCACCTTACTGGAATAGCAATACTTTTTCCACATTGAGGCCATTTGCAAAT
ATGTATGGTAATGCCGGAAATGCTCCATATGCTTATATGGTTCCTCCAACACCTTTTACT
GCTCCATATATGCGATCAATGCATGGTGGCGTGCCTTTACCTGGAGGAATCATGAGAATG
GGTGGTATGGCACTTCCAGCTGGAAACAGGGATGATCTGCCATTGAACCAATATGAGTAC
ATGGGCTTCCAGCTTGCGGAAGATAAATGCAGAATTCAGAATGAAAAACTGGGAAGTGGG
CAACATTGTCAGGCTGAGTCTAACTTAAAGGAGCATTACCCAAAAAATGATCGAGAAGCA
TCAGGAAAGTTCCATAAGGAGAGGGAACCAAGTACAAGTTGTTCTGGGGACAGCTTTGTT
CGAAGAACACGGAGAAAGCACCTCCATGTTGAGAAAAGAAGGGAGAGAAGTCCTCGTTCC
TCATCTGCTAGTAGAGATAAGGTGCCTCGTCACTCTGACAGGTCCAATTCTGTCACTGAT
GGTTTTCCTAGTAGTTCTGGTAAGCGAAGGAGAGAAAGTCATCAACACCATAATCGGGAC
TCAAGAAAGCGCCATGAGTGTGATTCTACTTTGGATCACTATCAAGCCTCTGATCGTAAA
CACAGAGTCGATTCTCATGTAAGAGAATCTCATCAGAAGCATCACCCAAGTTCTGCACTA
GAACCTAGTTCACCTGTGCACCAGAAAGCACGATTCAAAGAAAGGGGTTCTGGGCATGAT
CCAAAGTACTCTAGGTCCCATGCAAGAGACTCCAGCGATGAGGTACATGACAACAAGAGA
CGGAGAAGCAGCGGCTCCTTTGAAGATTACCGAGACGATTATTATCACAAGCGAAACAGA
GTTCATTGA

Peptide Sequence

PEP ID

XP_016469515.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107791886 [Nicotiana tabacum]
Sequence

MSIHFKFRSCPSFDSVDIDGRPSISVRELRLKIIRRKNLNICQDFDLVFSDALSGQEYND
ENFQISSGSSVIVKRVPAGTIPSTTKPPIGIVKDLGLKDADLIYHASGQVDVFDDFGADI
CPVAEGTFLDSDVGFGNKNCWDFEKENLSGPRFQNQKLDSSDLSQAIQRGSNQSKNDAKL
PEPKTGDVATLQKVVNPNIPALPNCNLPAELKCPLCNTFFKDAVMIPCCQHSFCEKCIRL
VLLEKAMCPKCLSSRCKVENLLPNLSLRQAIEHFLESQMVVTGSENALRKYAPDGESGIQ
MKDVSCAVTVVQREPEMPHSPSATGKGSNQVMAESFYDSLIRKNSRTMQQMDGGRGRYAN
HWNFPSVPDDPEDRQGESKPLNLLHSHVQDEADSSIKKNKGQWCDTRGGDVNFLPAGRVK
KDRNCYMCGSPDHLIRDCAFASNPNPMLQTGNPMLTGGFPGYPSPYWNSNTFSTLRPFAN
MYGNAGNAPYAYMVPPTPFTAPYMRSMHGGVPLPGGIMRMGGMALPAGNRDDLPLNQYEY
MGFQLAEDKCRIQNEKLGSGQHCQAESNLKEHYPKNDREASGKFHKEREPSTSCSGDSFV
RRTRRKHLHVEKRRERSPRSSSASRDKVPRHSDRSNSVTDGFPSSSGKRRRESHQHHNRD
SRKRHECDSTLDHYQASDRKHRVDSHVRESHQKHHPSSALEPSSPVHQKARFKERGSGHD
PKYSRSHARDSSDEVHDNKRRRSSGSFEDYRDDYYHKRNRVH

Transcript Sequence

Gene sequence data has not been registered.